jMOTU 1.0.7
jMOTU : Barcode DNA sequence data analysis made easy.jMOTU is a handy, easy to use package specially designed to help you cluster barcode DNA sequence data into molecular operational taxonomic units (MOTU). If you are not sure what a MOTU is, please see the DNA Barcoding pages on our website.jMOTU does the following:· reads input sequences in FASTA or NEXUS format· calculates distances between pairs of sequences using a combination of BLAST and the Needleman-Wunch exact global alignment algorithm· clusters input sequences into MOTU using various cutoff measuresjMOTU can process large datasets and uses a series of filtering steps to minimise the number of exact global alignments that must be performed. When calculating pairwise distances, jMOTU ignores gaps and counts only nucleotide mis-matches, making it relatively robust to sequencing errors caused by homopolymer runs. Clustering is carried out using a greedy algorithm that is not dependent on input sequence order. JMOTU has been tested on raw datasets of around 50,000 input sequences, and can cluster larger datasets by preforming preclustering of subsets of data before combining them for a global analysis.
Conclusion
To conclude jMOTU works on Windows operating system(s) and can be easily downloaded using the below download link according to Freeware license. jMOTU download file is only 6.4 MB in size.jMOTU was filed under the Science and Engineering category and was reviewed in softlookup.com and receive 5/5 Score.
jMOTU has been tested by our team against viruses, spyware, adware, trojan, backdoors and was found to be 100% clean. We will recheck jMOTU when updated to assure that it remains clean.
jMOTU user Review
Please review jMOTU application and submit your comments below. We will collect all comments in an effort to determine whether the jMOTU software is reliable, perform as expected and deliver the promised features and functionalities.Popularity 10/10 - Downloads - 63 - Score - 5/5
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| Category: | Science and Engineering |
| Publisher: | Mark Blaxter |
| Last Updated: | 10/11/2023 |
| Requirements: | Not specified |
| License: | Freeware |
| Operating system: | Windows |
| Hits: | 503 |
| File size: | 6.4 MB |
| Price: | Not specified |
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