HON-NEW
HON-NEW : A Method for Computing Conservative and Radical Nonsynonymous DistancesThe HON-NEW application was designed for estimating conservative and radical nonsynonymous distances between protein coding DNA sequences. The method is modified from the original method of Hughes, Ota, and Nei (1990)by taking into account the transition bias. Three types of amino acid classifications (charge, polarity and that of Miyata and Yasunaga) are provided. One can also define conservative and radical amino acid changes by oneself. One can define amino acid groups so that changes among groups are radical and within groups are conservative. To do that, creat a file named self.div. In this file, the first line should be the groups of amino acids (e.g., in the case of charge, there are three groups [-,0,+]), the second line is the number of amino acids in the first group, a space, and the amino acids in the group.
Conclusion
To conclude HON-NEW works on Windows operating system(s) and can be easily downloaded using the below download link according to Freeware license. HON-NEW download file is only 54 KB in size.HON-NEW was filed under the Science and Engineering category and was reviewed in softlookup.com and receive 4.8/5 Score.
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HON-NEW user Review
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| Category: | Science and Engineering |
| Publisher: | Jianzhi Zhang |
| Last Updated: | 16/11/2023 |
| Requirements: | Not specified |
| License: | Freeware |
| Operating system: | Windows |
| Hits: | 483 |
| File size: | 54 KB |
| Price: | Not specified |
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